: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Ganjizadeh, Ali, M.D.
Date: Wednesday, December 27, 2023 at 22:04
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Brainstem segmentation without pre-processing
External Email - Use Caution
Good evening,
I am trying to work
External Email - Use Caution
Good evening,
I am trying to work with segmentBS.sh. I want to pass my .nii.gz files that are
already pre-processed with HD-BET, but I don't want to use recon-all as the
first step because it takes a lot of time. I also tried recon-all -autorecon2
an
