Hi Shane
by far the best way to do this is if you have a T2 or FLAIR scan that is
high-enough resolution (i.e. around 1mm isotropic).
If not, you can try the graph cuts skull stripping option in recon-all.
It is more aggressive than the watershed (which is the default).
cheers
Bruce
On W
Hi Freesurfer Users,
I am checking my data and there are many scans with a bit of dura being
captured as GM. I have attached some screenshots below. This happens in more
than 50% of my subjects. I am removing them manually them using Freeview, then
running the autorecon-pial. But this will tak
