Re: [Freesurfer] Apply mris_apply_reg for a label

2016-07-05 Thread Douglas N Greve
I think it will be easier with mris_apply_reg. You might need to get the newest version with can handle labels ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mris_apply_reg run it something like mris_apply_reg --src-label lh.source.label --streg lh.sphere.left_right rh.sphere.lef

Re: [Freesurfer] Apply mris_apply_reg for a label

2016-06-17 Thread Alexandre Routier
Hello, I am a little but confused with the syntax: I have a drawn label lh.manual.label and I want it on the right hemisphere and I was thinking of this command: mri_label2label --srcsurfreg lh.sphere.reg --targsurfreg rh.sphere.reg --surfreg lh.sphere.left_right --regmethod surface --hemi lh --sr

Re: [Freesurfer] Apply mris_apply_reg for a label

2016-06-16 Thread Bruce Fischl
Hi Alexandre try mri_label2label using the ?h.sphere.left_right cheers Bruce On Thu, 16 Jun 2016, Alexandre Routier wrote: Hello everyone, I have a label for the left hemisphere for my subject but I don't understand the syntax to apply mris_apply_reg on this label to obtain the right hemispher

[Freesurfer] Apply mris_apply_reg for a label

2016-06-16 Thread Alexandre Routier
Hello everyone, I have a label for the left hemisphere for my subject but I don't understand the syntax to apply mris_apply_reg on this label to obtain the right hemisphere version. mris_left_right_register was performed to get lh.sphere.left_right and lh.sphere.left_right but I don't know how to