Not really. If you pass it an input that is already ACPC, you can add
-conform-dc to keep the orientation.
On 10/14/2021 9:44 AM, Zhengchen Cai wrote:
External Email - Use Caution
Hello FreeSurfer Developers,
I wonder if we have a function that could automatically align T1w to
ACPC
External Email - Use Caution
Hello FreeSurfer Developers,
I wonder if we have a function that could automatically align T1w to ACPC
before running recon-all? Or if we have an option in recon-all that could
do this ACPC alignment automatically? I noticed there are such ways after
r
