Re: [Freesurfer] AAL atlas question

2016-03-03 Thread pfotiad
Hi Doug, Thanks for your response! Panos > I would recon the mni152 (or whatever space the AAL atlas is in), map > the AAL ROIs onto the surface (vol2surf), then use mri_surf2surf to > transfer them to the individual. > > On 02/29/2016 06:37 PM, pfot...@nmr.mgh.harvard.edu wrote: >> Hi FS commun

Re: [Freesurfer] AAL atlas question

2016-03-03 Thread Douglas N Greve
I would recon the mni152 (or whatever space the AAL atlas is in), map the AAL ROIs onto the surface (vol2surf), then use mri_surf2surf to transfer them to the individual. On 02/29/2016 06:37 PM, pfot...@nmr.mgh.harvard.edu wrote: > Hi FS community, > > I have recon-ed a set of subjects and I was

Re: [Freesurfer] AAL atlas question

2016-03-01 Thread Makaretz, Sara Johanna
du Subject: [Freesurfer] AAL atlas question Hi FS community, I have recon-ed a set of subjects and I was interested in also obtaining structural info (cortical thickness, gray matter volume, surface area etc.) based on a different atlas than the ones FS is using, and in particular the AAL atlas. I was

[Freesurfer] AAL atlas question

2016-02-29 Thread pfotiad
Hi FS community, I have recon-ed a set of subjects and I was interested in also obtaining structural info (cortical thickness, gray matter volume, surface area etc.) based on a different atlas than the ones FS is using, and in particular the AAL atlas. I was wondering whether my approach would be