Re: [Freesurfer] SAMSEG - hanging for FLAIR lesion segmentation

2024-09-11 Thread Alisha Davis
oduced by samseg is aligned with your FLAIR image? There might be an issue with the initial template registration. If that is not the case, can you provide the full SAMSEG log? A warning might have been issued before it hung there. Stefano  [Freesurfer] SAMSEG - hanging for FLAIR les

[Freesurfer] SAMSEG - hanging for FLAIR lesion segmentation

2024-09-06 Thread Stefano Cerri
ning might have been issued before it hung there. Stefano [Freesurfer] SAMSEG - hanging for FLAIR lesion segmentation <https://www.mail-archive.com/search?l=freesurfer@nmr.mgh.harvard.edu&q=subject:%22%5C%5BFreesurfer%5C%5D+SAMSEG+%5C-+hanging+for+FLAIR+lesion+segmentation%22&o=newest&

[Freesurfer] SAMSEG - hanging for FLAIR lesion segmentation

2024-09-05 Thread Sravanthi Upadrasta
External Email - Use Caution Hi, I am encountering an issue with Samseg while extracting lesion information from a CUBE FLAIR image. The process hangs for a long time and I have to forcekill the process after almost 2 hours. I did not have this issue with same subject T1w and T2 F