Re: [Freesurfer] -notalcheck question

2011-10-26 Thread Douglas N Greve
Hi Chris, try running mni152reg and check whether it works ok or not. This uses FLIRT to register to the MNI152. If that works, then I can write something that will compute a matrix to the MNI305. If you can't get a good taliariach registration, then it's not the end of the world. The individua

[Freesurfer] -notalcheck question

2011-10-26 Thread Christopher McCarthy
Freesurfer Experts, I am having lots of success, and making progress, with FreeSurfer thus far. I have been able to load DICOMS into Slicer3 to reorient, and resample them, after using FSL to extract the brain. Loading these brains into FreeSurfer is straight forward, and I've run them through th