Great! OK. Now I understand. Thanks for reply.
Petr
-- Původní zpráva --
Od: Eugenio Iglesias
Komu: Freesurfer support list
Datum: 15. 4. 2014 16:18:59
Předmět: Re: [Freesurfer] FS volume discrepancies
"Dear Petr,
the volumes from the subfields are in voxels. Since the voxels
Thanks for reply. But adding subfield volumes together leads to too high
number compared to overall hippocampus volume. Like 9500 mm3 compared to 2.1
mm3.
Petr
-- Původní zpráva --
Od: Bruce Fischl
Komu: Freesurfer support list
Datum: 15. 4. 2014 14:35:13
Předmět: Re: [Freesu
I have several issues concerning automated volumes calculation. When you
look at the aseg.stat for hippocampal volume (in mm3) it gives different
value compared to hippocampal subfields volume calculation (which comes in
voxels but there is stated that 1 voxel is 0.5mm3). How is it possible? I
Hi all, we ran FS with confirmed 30 AD/ctrls and got wierd results:
hippocampi almost equal and many regions (accumbens, BG and others) greater
volume greater in AD compared to controls. On the other hand cort surface
area was smaller in AD as well as temporal gyri and many other gyri. What
cou
Hallo, now I use cc...
Actually I gave you wrong info - I DID rename file patient.mgz to 001.mgz
and not orig.mgz as I wrote before, sorry.
I attach recon-all.log file with errors from my last run. It is about nu_
correct.
Thanks for help, Petr
-- Původní zpráva --
Dear members,
when I run recon_all -subjid name -autorecon1 process stops with ERROR at nu
_correct. This happens for DICOM but also IMA file type. I tried several
brains. Do you have any idea what is wrong?
Thanks much, Petr Zach
___
Freesurfer mail
