[Freesurfer] NIH funded postdoc position at Child Mind Institute

S If any questions, please reach out to the PI, Ting Xu (ting...@childmind.org ). ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only fo

[Freesurfer] Data Analyst / Research Assistant Position at Child Mind Institute, New York {Disarmed}

External Email - Use Caution *The Autism Center of the Child Mind Institute **is inviting applications **for a Data Analyst position. The Data Analyst’s role is to assist and support the acquisition, manipulation, and analysis of data, as well as the reporting of brain imaging resu

[Freesurfer] Data Analyst & Research Assistant Position(s) - Child Mind Institute (New York)

/recruitment.html?cid=371b930b-70df-4a87-aa90-9681315857cd&jobId=245002&lang=en_US&source=CC3&ccId=19000101_000001 -- Ting Xu, PhD Research Scientist Child Mind Institute childmind.org 445 Park Avenue (entrance on 56th Street) New York, NY 10022 Email: ting.

[Freesurfer] convert nii to gii? mri_vol2surf and mri_convert error

Hi list, I need to project functional volume data to surface with GIFTI (.gii) format, does anyone has experience to do that? Here is what I did: 1) mri_vol2surf --mov func.nii.gz --reg bbregister.dat --trgsubject fsaverage --interp trilin --projfrac 0.5 --hemi ?h --o func_on_fsaverage.?h.nii.gz

Re: [Freesurfer] Resample the surface mesh

gt; Thomas > > On Fri, Nov 21, 2014 at 4:08 AM, ting xu wrote: > > Dear freesurfer experts, > > > > Is there any way to down resample the native surface mesh and register > the > > functional volume data to the down resa

Re: [Freesurfer] Odd thing about mris_convert? Position changed from freesurfer format to .stl

(e.g. in matlab) cheers Bruce On Fri, Nov 21, 2014 at 12:18 AM, ting xu wrote: > Hi there, > > In my understanding, mris_convert does not change any information > (vertices coordinates and triangles) during converting, right? However, I > observed odd thing as bellow

[Freesurfer] Odd thing about mris_convert? Position changed from freesurfer format to .stl

Hi there, In my understanding, mris_convert does not change any information (vertices coordinates and triangles) during converting, right? However, I observed odd thing as bellow, Command I used:* mris_convert subjid/surf/lh.white subjid/surf/lh.white.stl* I convert the white surface to .stl for

[Freesurfer] Resample the surface mesh

Dear freesurfer experts, Is there any way to down resample the native surface mesh and register the functional volume data to the down resampled surface in freesurfer? Many thanks, Ting ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https:/

[Freesurfer] Map both hemisphere to lh of fsaverage_sym

Dear FreeSurfers, I have data has been recon-all analyzed. I would like to compare the symmetry of function/structure property between LH and RH, such as cortical thickness. I already know that the vertices in the left hemisphere are not correspond to vertices in the right hemisphere. I would like

Re: [Freesurfer] issue about LME Matlab tools

> Finally, even when the set of random effects is correctly specified the > iterative estimation procedure may not converge at several vertices (eg. > 10% or may be more of the total number of vertices under analysis). > > Hope this helps. > > Best > -Jorge > > &

[Freesurfer] issue about LME Matlab tools

Dear all, A few questions come to me when I used LME Matlab toolbox. Then Jorge kindly answered my questions and he also asked me to post our discussion to Freesurfer list so everyone knows what's going on here :) Cheers, Ting --- *S