Re: [Freesurfer] Questions regarding recon-all command

2014-07-23 Thread soumyabrata.dey
you sure that they are nifti and not analyze? Analyze is to be avoided as it doesn't contain enough information to tell left from right Cheers Bruce On Jul 22, 2014, at 8:01 PM, "soumyabrata.dey" mailto:soumyabrata@knights.ucf.edu>> wrote: ?Hi All, I am new to fre

[Freesurfer] Questions regarding recon-all command

2014-07-22 Thread soumyabrata.dey
?Hi All, I am new to freeSurfer and need your guidance for some of the doubts I have. I have installed freeSurfer in a windows 7 machine using virtualBox. I am trying to process some of my own sMRI data using freeSurfer software. The data is skull-stripped and has cerebellum. The format of th