[Freesurfer] Freesurfer surface circle of pre-defined size

2013-07-26 Thread sarahp
Hello Freesurfer Experts, We would like to use PySurfer's function plot_label_foci.py to automatically create circular labels of a pre-defined radius (eg. 14mm) on the fsaverage surface of freesurfer. What are the specified units of "n_steps" in the command line argument "utils.coord_to_label(sub

[Freesurfer] Circular label of pre-defined radius on fsaverage

2013-07-18 Thread sarahp
Hello FreeSurfer Experts, We would like to automatically create circular labels of a pre-defined radius (e.g. 14mm) on the fsaverage surface in freesurfer. For each label, a target vertex with pre-defined RAS/Talairach coordinates should be in the center. Would this be possible? Thank you, Sara

[Freesurfer] Freesurfer surface circle of pre-defined size

2013-07-11 Thread sarahp
I'd like to make a circle of a pre-defined size on the freesurfer surface, with RAS coordinates as the center of the circle. What would be the best way to do this? ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.