[Freesurfer] CorticalParcellation for mask

2020-02-07 Thread sang ho shin
External Email - Use Caution Dear freesurfer experts, I am trying to make mask for '1027 ctx-lh-rostralmiddlefrontal, 2027 ctx-rh-rostralmiddlefrontal ' on MNI standard image (MNI152_T1_2mm_brain.nii) (FreeSurferColorLUT

Re: [Freesurfer] Brodmann area parcellation

2019-10-07 Thread sang ho shin
oxels in final mask* Count: 0 0.00 16777216 0.00 mri_binarize done ᐧ 2019년 10월 7일 (월) 오후 4:20, Greve, Douglas N.,Ph.D. 님이 작성: > You can to run the full recon-all on a given subject's data, and it will > create the broadmann areas > > On 10/5/2

[Freesurfer] Brodmann area parcellation

2019-10-04 Thread sang ho shin
External Email - Use Caution Dear Freesurfer Developers, I am trying to get the seed mask of premotor and motor cortex. Because I can't get it through 'recon-all -all', I tried to find brodmann area ('recon-all -s subjid -ba-labels') But I received ERROR message. Can you tell me

[Freesurfer] mask of premotor cortex and primary cortex

2019-10-03 Thread sang ho shin
External Email - Use Caution Dear Freesurfer Developers, I have analyzed connectivity between striatum and different brain cortex with diffusion weighted MRI. I completed recon-all on all participants. *SHINui-iMac:~ shinsangho$ recon-all -s NOR86_AHJ -i ~/sangho/NOR86_AHJ/NOR86_A