[Freesurfer] Installation FS

2011-11-28 Thread nooshin n.zade
Dear FreeSurfer Group I have some problem for installing the FS. Using following links, I downloaded and installed freesurfer-Darwin-leopard. For next step, in terminal when I write "source $FREESURFER_HOME/SetUpFreeSurfer.sh" or "source $FREESURFER_HOME/SetUpFreeSurfer.csh" it says that "No such

[Freesurfer] Question about tkmedit

2011-11-09 Thread nooshin n.zade
Dear Freesurfer Expers I have installed FS on the new mini Mac today, it can open bert with tkmedit and tksurfer. Using tkmedit for seeing my subject in /Users/nzadeh/freesurfer/subjects, it says "cannot find subject N3237c in /Users/nzadeh/freesurfer/subjects or it is not readable by you" but whe

[Freesurfer] Fwd: A question about recon-all

2011-11-08 Thread nooshin n.zade
Dear Freesurfer Group I have found a problem in running my subjects. With "recon-all -autorecon1 -autorecon2 -autorecon3 -subjid N?" I ran several subjects after making corrections, but suddenly I received error message as following, and I can not run rest of the subjects. It is saying the subject