Re: [Freesurfer] tkmedit

2016-06-15 Thread kojima_masaki_mail
Thanks! I will use it. Best,  Kojima  - Original Message - >From: Bruce Fischl >To: kojima_masaki_m...@yahoo.co.jp; Freesurfer support list > >Date: 2016/6/15, Wed 10:32 >Subject: Re: [Freesurfer] tkmedit > >yes! >On Wed, 15 Jun 2016, kojima_masaki_m...@yahoo.co.jp wrote: > >> Hi Bru

Re: [Freesurfer] tkmedit

2016-06-14 Thread kojima_masaki_mail
Hi Bruce Thank you for useful advice. I referred to FreesurfuerWiki and tried to use tkmedit to check whether recon is accurate or not. Now I am trying to use freeview. Is it possible to do these procedure with freeview instead of tkmedit? Regards, Kojima - Original Message - >From: B

Re: [Freesurfer] tkmedit

2016-06-14 Thread kojima_masaki_mail
Thank you for quick reply. I finished preprocessing and tried to check imagies, but tkmedit does not work. Please let me know how to do. Kojima - Original Message - >From: "kojima_masaki_m...@yahoo.co.jp" >To: "freesurfer@nmr.mgh.harvard.edu" >Date: 2016/6/14, Tue 17:53 >Subject: [Fr

[Freesurfer] tkmedit

2016-06-14 Thread kojima_masaki_mail
Hi.  I have this error, when I was doing tkmedit PSY1001fs /Users/MRI/Desktop/fsurfer_test_kojima/Surf_data_main/PSY1001fs/mri/brainmask.mgz -aux /Users/MRI/Desktop/fsurfer_test_kojima/Surf_data_main/PSY1001fs/mri/wm.mgz -surfs ERROR: Assertion failed: (!c->out.queue_len), function write_vec,