[Freesurfer] ACPC alignment before processing

2021-10-14 Thread Zhengchen Cai
External Email - Use Caution Hello FreeSurfer Developers, I wonder if we have a function that could automatically align T1w to ACPC before running recon-all? Or if we have an option in recon-all that could do this ACPC alignment automatically? I noticed there are such ways after r

[Freesurfer] Do you suggest to denoise T1 before feed it to Freesurfer

2016-09-27 Thread Zhengchen Cai
Hi Freesurfers, In order to get the better segmentation and surfaces by Freesurfer, do you think it is necessary to denoise T1 before feed it to Freesurfer? Since there are several advanced MRI denoising methods which are not covered in FS preprocessing, I though it would be better to perform one