Re: [Freesurfer] Flattening the surface

xture intensity of each vertex is stored in the texture mapping file and eventually mapped onto the vectorized surface. Thanks, Younghoon Kim -- Younghoon Kim, Dep. of Bio and Brain Engineering, KAIST OMICS Lab -- younghoon.h@gmail.com aktivh...@kaist.

Re: [Freesurfer] Flattening the surface

file and eventually mapped onto the vectorized surface. Thanks, Younghoon Kim -- Younghoon Kim, Dep. of Bio and Brain Engineering, KAIST OMICS Lab -- younghoon.h@gmail.com aktivh...@kaist.ac.kr On July 26, 2016 at 5:51:01 PM, Bruce Fischl

Re: [Freesurfer] Flattening the surface

segmented brain area (the pixel intensity on the surface of the volumetric data) to the generated surface (vectorized surface). I wonder whether this can be done in a similar way to the way you project fMRI signal to the surface. Thanks, Younghoon Kim -- Younghoon Kim, Dep. of Bio and Brain

Re: [Freesurfer] Flattening the surface

Hi Bruce, Yes Brain_FS.mgz is a segmented volume. It’s not a MRI image, and the size is about 3000x2000x140. (We obtained this brain image using different imaging methods) Our machine has 16GB RAM. Thanks, Younghoon Kim -- Younghoon Kim, Dep. of Bio and Brain Engineering, KAIST OMICS Lab

Re: [Freesurfer] Flattening the surface

12 22:28:01 nicks Exp $ Cannot calloc() Would this be because my input data is not compatible with the mri_tessellate command? Thanks, Younghoon Kim -- Younghoon Kim, Dep. of Bio and Brain Engineering, KAIST OMICS Lab Wellman Center, Massachusetts General Hospital Bouma’

Re: [Freesurfer] Flattening the surface

Hi Bruce, Great! I’m not an expert in FreeSurfer, so can you give me some advice how to generate a surface of our volumetric data and flatten it? Thanks, Younghoon Kim -- Younghoon Kim, Dep. of Bio and Brain Engineering, KAIST OMICS Lab Wellman Center, Massachusetts General Hospital Bouma’s

Re: [Freesurfer] Flattening the surface

. Thanks, Younghoon Kim -- Younghoon Kim, Dep. of Bio and Brain Engineering, KAIST OMICS Lab Wellman Center, Massachusetts General Hospital Bouma’s Lab -- younghoon.h@gmail.com aktivh...@kaist.ac.kr On July 20, 2016 at 5:00:55 PM, Bruce Fischl (fis

[Freesurfer] Flattening the surface

volumetric data. We wonder if this could be adapted to our data set. Can anyone offer some advice on how to apply FreeSurfer to this more generic task? Thanks, Younghoon Kim -- Younghoon Kim, Dep. of Bio and Brain Engineering, KAIST OMICS Lab Wellman Center, Massachusetts General Hospital Bouma’s Lab