you create cluster1_roi.mgz? Is it in register with colin?
Bruce
On Wed,
23 Jul 2014, Weiss, Sarah wrote:
> Hi Bruce,
>
> To create the .mgh, we used the following command:
> mri_vol2surf --src cluster1_roi.mgz --srcreg cluster1_roi.dat --hemi rh --o
> ./test-rh.mgh --out_type mgh --float
-processed colin data?
On Wed, 23 Jul 2014, Weiss, Sarah wrote:
> Hi Bruce,
>
> Thanks for the input. Here are some of the output lines that I get when I try
> overlaying one of our ROI surfaces (test-eh.mgh) onto colin (we had created a
> copy rk, but are back to using
trying to overlay it on
the colin surface or on some other subject (rk?). If you load the
[lr]h.white surface over the volume for colin does it look ok?
cheers
Bruce
On Wed, 23 Jul
2014, Weiss, Sarah wrote:
> Hi all,
> We are still struggling with this issue - any ideas? Here is some more
>
surface going to create a problem when we do successfully load our label file?
If so, is there a way to align the two in the same coordinate space?
Thank you!
-- Sarah Weiss
________
From: Weiss, Sarah
Sent: Friday, July 18, 2014 3:02 PM
To: freesurfer@nmr.mgh.harvard.edu
Sub
Dear Freesurfer experts,
We are trying to convert a volume created in SPM and saved as a .nii file into
a label to overlay on a Freesurfer surface. We are using a template surface
found online, colin (http://mindboggle.info/data.html). We are able to display
our .nii in freeview successfully. T
