[Freesurfer] tkregisterfv problems

2019-12-10 Thread Vicky Yang
External Email - Use Caution Dear Freesurfer experts, I am using bbregister to register my functional template image into T1 image. The bbregister is running fine. But when I tried to view registration using tkregisterfv, the window opened and closed quickly with an error message:

Re: [Freesurfer] Question about using tkregisterfv to check registration

2019-10-07 Thread Vicky Yang
be some other problem. Are > you totally sure that the anatomical and PET come from the same subject? > > On 10/3/2019 12:59 PM, Vicky Yang wrote: > > External Email - Use Caution > Hi Doug, > > Thanks for your respond! I ran the the command with debug flag and figured

Re: [Freesurfer] Question about using tkregisterfv to check registration

2019-10-03 Thread Vicky Yang
eg pet_T1.reg.lta > and send the terminal output? > > On 10/2/2019 3:58 PM, Vicky Yang wrote: > > External Email - Use Caution > Dear Freesurfer experts, > > I used mri_coreg to register my pet data to T1 like below: > > mri_coreg --mov pet.nii

[Freesurfer] Question about using tkregisterfv to check registration

2019-10-02 Thread Vicky Yang
External Email - Use Caution Dear Freesurfer experts, I used mri_coreg to register my pet data to T1 like below: mri_coreg --mov pet.nii.gz --ref T1.nii --reg pet_T1.reg.lta After coregistering, I checked the registration using tkregisterfv like below: tkreg