[Freesurfer] Using PD Scans for Inhomogeneity Correction

2020-05-21 Thread Tali Weiss
External Email - Use Caution Dear all, 1. BV have a tool: https://www.brainvoyager.com/bv/doc/UsersGuide/HighResDataAnalysis/UsingPDScansForInhomogeneityCorrection.html Is freesurfer have something similar for MPRAGE (i use recon-all) 2.Is PD is suitable also to correct MP2RAG

[Freesurfer] recon-all.v6.hires (macos) ERROR: cannot find conf2hires

2020-04-18 Thread Tali Weiss
External Email - Use Caution Dear FreeSurfer Developers, 1. I have mp2rage on 7T (Siemens, MAGNETOM Terra) resolution 1 mm3 , from the forum i see it is recommend to use: ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/6.0.0-patch/hcp/ If i correctly it ignore INV1, I