Re: [Freesurfer] Input files format

2014-10-02 Thread Svetlana Soloveva
Ok, thanks a lot for your help! 2014-10-02 9:30 GMT-04:00 Bruce Fischl : > not other than the typical acquisition ones (T1-weighted, good contrast, > about 1mm voxel size, etc...) > > > On Thu, 2 Oct 2014, Svetlana Soloveva wrote: > > I guess it should be dicom, I need to a

Re: [Freesurfer] Input files format

2014-10-02 Thread Svetlana Soloveva
I guess it should be dicom, I need to ask our colleagues who acquire the data. Are there any other requirements for input images if they are dicom? Thanks a lot! 2014-10-02 9:18 GMT-04:00 Bruce Fischl : > almost certainly yes. I assume they are dicom? > > On Thu, 2 Oct 2014, Svetlana

Re: [Freesurfer] Input files format

2014-10-02 Thread Svetlana Soloveva
2 Oct 2014, Svetlana Soloveva wrote: > > Hi Bruce, >> >> Thnaks! I think it is CTF MEG MRI file created by MRIConverter. >> >> 2014-10-02 8:35 GMT-04:00 Bruce Fischl : >> Hi Svetlana >> >> what format is *.mri? I don't think I've

Re: [Freesurfer] Input files format

2014-10-02 Thread Svetlana Soloveva
Hi Bruce, Thnaks! I think it is CTF MEG MRI file created by MRIConverter. 2014-10-02 8:35 GMT-04:00 Bruce Fischl : > Hi Svetlana > > what format is *.mri? I don't think I've ever heard of it > Bruce > > On Thu, 2 Oct 2014, Svetlana Soloveva wrote: > > Dear al

[Freesurfer] Input files format

2014-10-01 Thread Svetlana Soloveva
Dear all, If I understand correctly, it is recommended to use original MRI files as an input. However, I have only *.mri file. First, I was able to run reconstruction following fieldtrip pipeline which includes some preprocessing of *.mri and writing resulting files in *.mgz format that can be use