after recon-all -all?
Does /usr/local/freesurfer5/average/lh.DKTatlas40.gcs exist?
On 12/17/15 5:53 PM, Schweren, LJS (med) wrote:
Dear Freesurfer experts,
I'm trying to get BrainSeg for 5 subjects. I'm running the following commands:
for scan in ...
do
cd $SUBJECTS_DIR
recon-all -al
Dear Freesurfer experts,
I'm trying to get BrainSeg for 5 subjects. I'm running the following commands:
for scan in ...
do
cd $SUBJECTS_DIR
recon-all -all -subjid $scan
done
It completes recon-all, but with errors. These are the errors:
[me@mycomp]$ cat recon-all.error
-
De inhoud van dit bericht is vertrouwelijk en alleen bestemd voor de
geadresseerde(n). Anderen dan de geadresseerde(n) mogen geen gebruik maken van
dit bericht, het niet openbaar maken of op enige wijze verspreiden of
vermenigvuldigen. Het UMCG kan niet aansprak
tatistical modeling
On 2/2/15 3:56 AM, Schweren, LJS (med) wrote:
Dear freesurfer experts,
I investigate case-control differences in cortical thickness in a group of 11
to 30 year olds. I ran vertex-wise analyses with glmfit, with covariates age
and age-squared, to take into account confounding by
Dear freesurfer experts,
I investigate case-control differences in cortical thickness in a group of 11
to 30 year olds. I ran vertex-wise analyses with glmfit, with covariates age
and age-squared, to take into account confounding by age as we have a very wide
age range. I use monte-carlo simula
Dear Freesurfer experts,
A while ago I sent the question below to the FS mailinglist, but it was never
answered... Would anyone be able to help me with this issue?
Thank you very much in advance!
Best wishes,
Lizanne
Dear Freesurfer experts,
I am modelling multiple covariates (age, SES, nr
