[Freesurfer] aparcstats2table

2020-11-05 Thread Saman Fouladi
External Email - Use Caution hi I run in linux command: """ aparcstats2table --hemi lh --subjects /home/team33/MRI4/subj10/stats --parc aparc.a2009s --meas meancurv --tablefile /home/team33/ aparcstats .txt """

[Freesurfer] aparcstats2table

2020-11-04 Thread saman fouladi
External Email - Use Caution hi I run in linux command:""" aparcstats2table --hemi lh  --subjects /home/team33/MRI4/subj10/stats --parc aparc.a2009s  --meas meancurv --tablefile /home/team33/ aparcstats.txt"

[Freesurfer] (no subject)

2020-11-03 Thread saman fouladi
External Email - Use Caution hi I run in linux command:""" aparcstats2table --hemi lh  --subjects /home/team33/MRI4/subj10/stats --parc aparc.a2009s  --meas meancurv --tablefile /home/team33/ aparcstats.txt"

Re: [Freesurfer] please help me

2020-10-24 Thread saman fouladi
question and up to you! Bruce   From: freesurfer-boun...@nmr.mgh.harvard.edu On Behalf Of saman fouladi Sent: Saturday, October 24, 2020 7:17 AM To: Freesurfer support list Subject: Re: [Freesurfer] please help me   External Email - Use Caution hi   Which output can I

Re: [Freesurfer] please help me

2020-10-24 Thread saman fouladi
External Email - Use Caution hi Which output can I use to predict age after recon-all? On Friday, October 23, 2020, 11:46:09 PM GMT+3:30, saman fouladi wrote: yes and replacing -sdir with -sd thank you very much On Friday, October 23, 2020, 5:58:11 PM GMT+3:30

[Freesurfer] (no subject)

2020-10-23 Thread saman fouladi
External Email - Use Caution hi I was running several  putty windows for recond-all MRI pictures. Some putty were inactived during running. How can I activate them? ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https:

Re: [Freesurfer] please help me

2020-10-23 Thread saman fouladi
?? On Thursday, October 22, 2020, 5:40:05 PM GMT+3:30, saman fouladi wrote: hi Bruce thank you very very much On Wednesday, October 21, 2020, 9:05:36 PM GMT+3:30, Fischl, Bruce wrote: #yiv9925090239 -- filtered {}#yiv9925090239 filtered {}#yiv9925090239 filtered {}#yiv9925090239

Re: [Freesurfer] please help me

2020-10-22 Thread saman fouladi
: freesurfer-boun...@nmr.mgh.harvard.edu On Behalf Of saman fouladi Sent: Wednesday, October 21, 2020 11:57 AM To: Freesurfer support list Subject: Re: [Freesurfer] please help me   External Email - Use Caution hi   Thank you for your response   I have 60 subject MRI

Re: [Freesurfer] please help me

2020-10-21 Thread saman fouladi
proper dicom series (for your 3D T1-weighted scan), and it will spend a few hours doing stuff   Cheers Bruce   From: freesurfer-boun...@nmr.mgh.harvard.edu On Behalf Of saman fouladi Sent: Tuesday, October 20, 2020 4:12 PM To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] please help

[Freesurfer] please help me

2020-10-20 Thread saman fouladi
External Email - Use Caution hi I want to process MRI images to extract Morphology features. I convert my dcm file to nii format by mri-convert command and then  I used FSL software and BET(Best extraction Tool). Next I do not know what to do to extract morphological features? My