Re: [Freesurfer] Reduction of image size

2015-02-09 Thread SOURAV RANJAN KOLE
n...@nmr.mgh.harvard.edu] on behalf of Bruce Fischl > [fis...@nmr.mgh.harvard.edu] > Sent: Sunday, February 08, 2015 6:34 PM > To: Freesurfer support list > Subject: Re: [Freesurfer] Reduction of image size > > Hi Sourav > > Can you explain why you are reslicing? > Cheers > Bruce &

Re: [Freesurfer] Reduction of image size

2015-02-08 Thread SOURAV RANJAN KOLE
, February 08, 2015 6:34 PM To: Freesurfer support list Subject: Re: [Freesurfer] Reduction of image size Hi Sourav Can you explain why you are reslicing? Cheers Bruce On Feb 8, 2015, at 7:26 PM, SOURAV RANJAN KOLE mailto:sourav.k...@utah.edu>> wrote: Thank you, again, Bruce. How do I determi

Re: [Freesurfer] Reduction of image size

2015-02-08 Thread SOURAV RANJAN KOLE
Fischl > [fis...@nmr.mgh.harvard.edu] > Sent: Sunday, February 08, 2015 4:12 PM > To: Freesurfer support list > Subject: Re: [Freesurfer] Reduction of image size > > mri_extract should do the trick > Bruce > On Sun, 8 Feb 2015, SOURAV RANJAN KOLE > wrote: > >> Dear

Re: [Freesurfer] Reduction of image size

2015-02-08 Thread SOURAV RANJAN KOLE
mri_extract should do the trick Bruce On Sun, 8 Feb 2015, SOURAV RANJAN KOLE wrote: > Dear Freesurfer community, > Please let me know of an elegant way to reduce image size from 256x256x256 > to 256x256x160 and keeping the voxel size the same. The images are currently > in analyze

[Freesurfer] Reduction of image size

2015-02-08 Thread SOURAV RANJAN KOLE
Dear Freesurfer community, Please let me know of an elegant way to reduce image size from 256x256x256 to 256x256x160 and keeping the voxel size the same. The images are currently in analyze format but I have access to mri_convert and ImageConvert. Thank you. Sourav

Re: [Freesurfer] Watershed

2014-07-22 Thread SOURAV RANJAN KOLE
, 2014 5:59 PM To: Freesurfer support list Subject: Re: [Freesurfer] Watershed Hi Sourav can you explain what failed? Was too much removed? Too little? What did you try to fix it? Bruce On Tue, 22 Jul 2014, SOURAV RANJAN KOLE wrote: > Hi Bruce, > > Thank you for your message. > > Y

Re: [Freesurfer] Watershed

2014-07-22 Thread SOURAV RANJAN KOLE
Sourav Are you sure the skull stripping isn't working? It can be hard to tell right on the midline Cheers Bruce > On Jul 18, 2014, at 5:38 PM, SOURAV RANJAN KOLE wrote: > > Sourav ___ Freesurfer mailing list Freesurfer@nmr.mgh.har