Re: [Freesurfer] Cortical Thickness Using N30R83 Atlas

ROI? Is there a way to also obtain non-segmented stats? Also, the reason I didn't map the ROI to fsaverage was because I didn’t have access...is there a way to change that? Thank you for your time. Best, Ryan -- Ryan Flores Clinical Research Coordinator On 6/14/18, 11:32

Re: [Freesurfer] Cortical Thickness Using N30R83 Atlas

External Email - Use Caution Great. That seemed to have worked. Is there a way to inspect that the ROIs have been correctly placed? Perhaps by using freeview? Best, Ryan -- Ryan Flores Clinical Research Coordinator On 6/14/18, 11:02 AM, "freesurfer

Re: [Freesurfer] Cortical Thickness Using N30R83 Atlas

las.nii.gz --trgsubject sub01 --trgsurfval hammers-01-lh.img --mapmethod nnf I tried running mri_surf2surf --help, but unfortunately the examples didn’t really apply to my case. I apologize for the potential trivial question in advance. Thanks again for your help. Best, Ryan -- Ryan Flore

[Freesurfer] Cortical Thickness Using N30R83 Atlas

vant. Any advice would be greatly appreciated. Thank you for your time. I look forward to hearing from you. Best, Ryan -- Ryan Flores Clinical Research Coordinator ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard

Re: [Freesurfer] Recon-all w/ Hammersmith atlas

External Email - Use Caution Hi Doug, I just wanted to follow up on this. Were you able to download the zip file ok? Best, Ryan On 4/18/18, 10:46 AM, "Ryan Flores" wrote: Yes, of course. Please see attached. Best, Ryan -- R

Re: [Freesurfer] Recon-all w/ Hammersmith atlas

Hi Doug, Thank you for your response. I attempted to run recon-all on the Hammersmith nifti file as suggested, but unfortunately it appears to have run into some issues. I’ve attached the recon-all.log for reference. Best, Ryan -- Ryan Flores Clinical Research Coordinator From: on behalf of