Re: [Freesurfer] anonymizing dicom files

2006-08-28 Thread Russ Poldrack
You can use the LONI deidentification debablet to do this:http://www.loni.ucla.edu/Software/Software_Detail.jsp?software_id=23cheersrussOn Aug 28, 2006, at 1:07 PM, Doug Greve wrote:Sorry, no clue.Najmeh Khalili M. wrote: sorry about nonstop posting!I'm trying to remove the patient names from dicom

Re: [Freesurfer] Perl problems with mac install

2005-07-27 Thread Russ Poldrack
hi - yes, nu_correct complained that it couldn't find various Perl files.  I did source the FreeSurferEnv.csh file before running - it seems that the PERL5LIB environment variable is not getting properly set by the script, as this is what I see even after sourcing the script:[russ-poldracks-power-m

[Freesurfer] Perl problems with mac install

2005-07-26 Thread Russ Poldrack
hi folks - I wanted to let you know that the tiger snapshot installer for mac doesn't properly install the perl libraries needed for some of the MNI tools.  I was able to get things to work by copying the relevant files into /System/Library/Perl/5.8.6, but I assume that you want the installer to do

[Freesurfer] problem with recon-all

2005-07-23 Thread Russ Poldrack
hi folks - I'm trying to get freesurfer (the latest Tiger snapshot) working on my mac but I'm having a problem with recon-all.  If I try to apply it to the bert data included in the distribution, it seems to set up ok but then it doesn't actually do anything.  here is the output from "recon-all-nmr