Re: [Freesurfer] Visualizing GLM analysis error

2016-01-14 Thread Myers, Peter
bject: Re: [Freesurfer] Visualizing GLM analysis error can you run mri_info on that file? Is it in fact a surface overlay? On Thu, 14 Jan 2016, Myers, Peter wrote: > > Thanks for these comments/suggestions. Still having troubles unfortunately. > > > I ran the command: > > f

[Freesurfer] Visualizing GLM analysis error

2016-01-14 Thread Myers, Peter
=aparc.annot:outline=1:overlay= cheers Bruce On Thu, 14 Jan 2016, Myers, Peter wrote: Hello all, I am trying to visualize the results of my GLM analysis. Unfortunately, I keep on running into errors. I run the command: freeview -f $SUBJECTS_DIR/fsaverage/surf/lh.inflated:annot=aparc.

[Freesurfer] Visualizing GLM analysis error

2016-01-14 Thread Myers, Peter
Hello all, I am trying to visualize the results of my GLM analysis. Unfortunately, I keep on running into errors. I run the command: freeview -f $SUBJECTS_DIR/fsaverage/surf/lh.inflated:annot=aparc.annot:annot_outline=1overlay=lh.Cog_Trial1.glmdir/lh-Avg-thickness-Cog_Trial1/sig.mgh: