[Freesurfer] ERROR: awk -f in Talairach registration and multibyte conversion failure; possibly due to region settings?

2024-02-23 Thread Mohn, Johannes Julius
External Email - Use Caution Dear Freesurfer Developers, I installed Freesurfer 6.0.0 fresh on a Macbook Pro (2021) with M1 chip running macOS Monterey 12.5. I tried to run recon-all on both on the bert data shipped with freesurfer and my own brain data in .nii.gz format (sta

[Freesurfer] Missingness and recent developments in longitudinal pipeline for pediatric samples

2018-07-09 Thread Mohn, Johannes
External Email - Use Caution Dear FS Experts and Community, we are working on a longitudinal dataset of structural T1w images in a pediatric sample assessed at 2 waves, 2 years apart (aged 6/7 and 8/9). As far as we know, it is yet unresolved whether the Freesurfer longitudina

[Freesurfer] Run the recon-all -all pipeline on structural T1w images in pediatric sample

2018-07-09 Thread Mohn, Johannes
External Email - Use Caution Dear FS Experts and Community, we would like to run the recon-all -all pipeline on structural T1w images in a pediatric sample ages 6-9. We intend to assess cortical thickness, surface area, and subcortical volume in both ROIs and for whole brain a