[Freesurfer] Read Freesurfer surfaces and annotation files in C++

External Email - Use Caution Hi, there are some easy to use Matlab/Python functions to read/write native Freesurfer files (.annot, surfaces etc.) available. Anyone knows something similar for C++ (VTK)? Thank you. ___ Freesurfer mailing

[Freesurfer] mri_vol2surf sample inside and outside of pial

External Email - Use Caution Hi, I have a short question concerning the mri_vol2surf command. Do the following parameters of the command return the maximum volume value (for each vertex) which occurs between 10 mm outside and 10 mm inside the pial surface (along normal vector)?

Re: [Freesurfer] mri_vol2surf for sampling spmT_0001.nii on pial surface

ael > > you can use --regheader, which uses the ras2vox matrices to compute the > registration (which is also what freeview does). > > cheers > Bruce > On Mon, 18 Feb > 2019, Michael Jordan wrote: > > > > > External Email - Use Caution > > > >

[Freesurfer] mri_vol2surf for sampling spmT_0001.nii on pial surface

External Email - Use Caution Hi, i would like to sample the t-values of a SPM output volume (spmT_0001.nii) onto the pial surface of the same subject. The volume is already aligned to the surface files (so if I view the volume as well as the surface files in Freeview they are alr