[Freesurfer] bug in freesurfer-dev (T2-specific parameters not passed to second call of mri_make_surfaces)

that in 6.0.0, when specifying -nsigma_below via the expert file, both the user-specified value and the standard value are passed to the second call of mris_make_surfaces). See below for more details on the specific freesurfer-dev behavior. Best, Marco Aqil Bug description: T2-specific

[Freesurfer] autorecon3 with T2_min parameter

External Email - Use Caution ?Hi, When calling recon-all autorecon3, with the -T2pial flag, and a -T2_min value specified via expert options file, I noticed that this parameter is passed to the first call of mris_make_surfaces, which looks, for example, as follows: --