[Freesurfer] mris_make_face_parcellation

2016-10-07 Thread Mamashli, Fahimeh
Dear Freesurfers, I have used mris_make_face_parcellation to divide the brain into smaller parcellations and then used mri_annotation2label to generate the labels. However, the problem is that the labels are ordered based on numbers and it is not clear which label belongs to which parcellation.

Re: [Freesurfer] mris_divide_parcellation

2016-10-06 Thread Mamashli, Fahimeh
late 3 Only labels that should be split need be specified in the splitfile. cheers Bruce On Thu, 6 Oct 2016, Mamashli, Fahimeh wrote: > > Hi, > Thanks for your help. I tried and it worked. However, the problem is that > this is doing for all brain and it is very hard to find out which

Re: [Freesurfer] mris_divide_parcellation

2016-10-06 Thread Mamashli, Fahimeh
equal area (either in the individual or in the group) On Fri, 16 Sep 2016, Mamashli, Fahimeh wrote: > Dear Freesurfer group, > I am going to divide a brain parcellation into divisions using > mris_divide_parcellation. As far as I know from the help comment, this > function &qu

[Freesurfer] mris_divide_parcellation

2016-09-16 Thread Mamashli, Fahimeh
Dear Freesurfer group, I am going to divide a brain parcellation into divisions using mris_divide_parcellation. As far as I know from the help comment, this function "divides one or more parcellations into divisions perpendicular to the long axis of the label". Is there any other program that do