Re: [Freesurfer] Coordinates of center of gravity of a cluster in Freesurfer

2013-03-16 Thread Maleki, Nasim
: [Freesurfer] Coordinates of center of gravity of a cluster in Freesurfer With mri_surfcluster you can add --centroid to the command line to get centroid of the cluster instead of max stat. You can do the same thing with mri_glmfit-sim doug On 3/14/13 3:06 PM, Maleki, Nasim wrote: Hi all, I would

[Freesurfer] Coordinates of center of gravity of a cluster in Freesurfer

2013-03-14 Thread Maleki, Nasim
Hi all, I would like to calculate the coordinates of center of gravity of a cluster in Freesurfer. Is there a way to do this in Freesurfer? Thanks, Nasim ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailma

[Freesurfer] Divisions for "anterior" and "posterior" insula?

2013-03-13 Thread Maleki, Nasim
Hi all, I have a hard time relating the boundaries of the insula defined by Freesurfer (Destrieux a2009s) with what is out there in the literature. Most of what is out there is described in terms of anterior and posterior insula, and I'm not sure if most of them match well with what is describe

[Freesurfer] Matching stats in SPSS and QDEC

2013-01-08 Thread Maleki, Nasim
Hi list, I have done an analysis using QDEC and now I would like to do set up similar statistical analysis in SPSS on some parcellated structures. I have the following setup in QDEC: 2 cohorts (patients, healthy control subjects) Continuous variable : demeaned Age Nuisance Factor: demeaned intr

[Freesurfer] Tksurfer display issue

2012-11-18 Thread Maleki, Nasim
Hi all, This issue was posted by someone else in October (please see below). I have the EXACT same problem. Does anyone have any ideas how fix this? Thanks, Nasim === Hi, everyone. The tksurfer can't initial a window in iOS 10.7.5. Has anyone me