External Email - Use Caution
Perfect that has worked.
Thank you so much for your help!
Have a great weekend,
Luke
> On 2 Dec 2022, at 16:57, Luke K Harper wrote:
>
> Thanks!
>
> As the subject ID in my example is A152 should this be replaced by $subj in
>
nd submitting mri_segstat. I always verify the
> printout from the echo first before submitting the jobs.
>
> Hope this helps.
>
> Best,
>
> Yujing
>
> From: freesurfer-boun...@nmr.mgh.harvard.edu
> <mailto:freesurfer-boun...@nmr.mgh.harvard.edu>
> <mail
gt; Best,
>
> Yujing
>
> From: freesurfer-boun...@nmr.mgh.harvard.edu
> <mailto:freesurfer-boun...@nmr.mgh.harvard.edu>
> <mailto:freesurfer-boun...@nmr.mgh.harvard.edu>> On Behalf Of Luke K Harper
> Sent: Friday, December 2, 2022 5:14 AM
> To: freesurf
External Email - Use Caution
Dear freesurfer,
I am attempting to extract LGI statistical data from a label running the
mri_segstats command
Here is the script I am attempting to run:
mri_segstats --slabel A152 rh rh.c1.label --i
$SUBJECTS_DIR/A152/surf/rh.pial_lgi --sum rh.apa
