Re: [Freesurfer] converting vertex numbers in .label files to R, A, S coordinates

2017-07-25 Thread Li Guo
RAS to "tkregisterRAS", one of our internal coordinate systems. See https://surfer.nmr.mgh.harvard.edu/fswiki/CoordinateSystems, you'll need to do the inverse of case #1. On 7/19/17 12:28 PM, Li Guo wrote: Dear Freesurfer experts, My question concerns the .label files and the c

[Freesurfer] converting vertex numbers in .label files to R, A, S coordinates

2017-07-19 Thread Li Guo
computing the vertex ID based on the R,A,S coordinates, or an alternative solution to represent the vertices on the surface based on the voxel coordinates--and the registration file I assume? Thank you very much! Best Li Guo & Florence Campana Thanks a

[Freesurfer] mkbrainmask-sess: couldn't find register.dof6.lta

2017-07-11 Thread Li Guo
Dear freesurfer developers, I’d like to ask about an error I encountered in Freesurfer v6.0 with mkbrainmask-sess. I am using macOS Sierra. Here is the error: error:"ERROR: cannot find /Users/lguo15/Documents/MATLAB/fMRI_P3/Fisch_P3_01/bold/register.dof6.lta, you might need to run register-ses