[Freesurfer] tksurfer.bin: tnl/t_vertex.c:413 error | load patch

2015-07-18 Thread Itamar Kahn
update will be great. Thanks, Itamar [kahn@kawakubo fsaverage]$ tksurfer fsaverage lh inflated -gray -patch $SUBJECTS_DIR/fsaverage/surf/lh.cortex.patch.flat . . . tksurfer.bin: tnl/t_vertex.c:413: update_input_ptrs: Assertion `a[j].inputstride == vptr->stride' failed. Abo

[Freesurfer] wm/pial surfaces from manually created surfaces

2014-07-23 Thread Itamar Kahn
Greetings, I would like to use two surfaces that I created manually on the same anatomy and to create a single subject with the surfaces such that one is the pial and the other is the wm surface. Any leads on how to achieve this will be greatly appreciated. Thanks, Itamar

[Freesurfer] fsaverage -> fsaverage3

2014-03-25 Thread Itamar Kahn
sphere registration available (these are fetal imaging surfaces). Thanks, Itamar _ Itamar Kahn, Ph. D., Assistant Professor Department of Physiology and Biophysics The Ruth and Bruce Rappaport Faculty of Medicine Technion – Israel Institute of

Re: [Freesurfer] display SPM group results

2006-07-25 Thread Itamar Kahn
Although partially overlapping what you've done already the following SPM toolbox enables you to overlay your data on the SPM canonical brain (colin27), fsaverage or any other surface.Checkhttp://spmsurfrend.sourceforge.net/and for documentationhttp://spmsurfrend.sourceforge.net/Documentation/Docum

Re: [Freesurfer] mris_glm

2005-06-27 Thread Itamar Kahn
_ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer