Dear all,
I am currently trying to automatically generate Freesurfer screenshots and, to
this purpose, I need to change the color scale of the surface overlay to "Color
Wheel - Inverse" and with specific min and max threshold.
Looking for a way to achieve this, I found this thread with simila
] mri_vol2surf Averaging with exclusion of specific
values
Hi Anna, don't use --projfrac-avg as that will average the values over the
ribbon (and so give non-integer results). Just use --projfrac
On 2/4/16 9:07 AM, Gardumi Anna (PSYCHOLOGY) wrote:
> Dear all,
>
> I have checked
Zoom 1.5 Elevation 5 Roll 0 -ss test
How can I set the colormap to "Color Wheel" option "Inverse" (i.e. low to high
values = blue to red) via command line?
Thank you in advance for your help!
Anna
-Original Message-
From: Gardumi Anna (PSYCHOLOGY)
Sent: maandag 1 feb
arest neighbor "interpolation", so
there is no averaging. Is this what you mean?
On 02/01/2016 09:53 AM, Gardumi Anna (PSYCHOLOGY) wrote:
>
> Dear FreeSurfer expert,
>
> I would like to project my maps from the "original" functional space
> (2.5mm iso, same for
Dear FreeSurfer expert,
I would like to project my maps from the "original" functional space (2.5mm
iso, same format as COPE images from FSL) to inflated FreeSurfer surfaces
(created from 1.0mm MPRAGE image with recon-all pipeline) excluding voxels with
a specific value (e.g. 0) from the averag
