[Freesurfer] open Post-doc position

2012-06-01 Thread Esther Walton
Post-doc position within the Collaborative Research Centre 940 "Volition and Cognitive Control: Mechanisms, Modulators, and Dysfunctions" at the Department of Child and Adolescent Psychiatry, University Hospital C. G. Carus, Dresden University of Technology

[Freesurfer] open Research position (PhD)

2012-06-01 Thread Esther Walton
___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for

[Freesurfer] open PhD position

2012-03-14 Thread Esther Walton
Research position (PhD) in translational developmental neuroscience (with a focus on eating disorders) at the Department of Child and Adolescent Psychiatry, University Hospital Carl Gustav Carus, Dresden University of Technology, Germany PLEASE REPOST F

Re: [Freesurfer] S_intraparietal-and_Parietal_transverse.label

2011-06-02 Thread Esther Walton
: freesurfer@nmr.mgh.harvard.edu > Subject: Re: [Freesurfer] S_intraparietal-and_Parietal_transverse.label > > Hi Esther > > I don't see a volume overlay, just one on the inflated surface. Is that > what you mean? If not, can you resend and explain? > > Bruce >

Re: [Freesurfer] S_intraparietal-and_Parietal_transverse.label

2011-06-01 Thread Esther Walton
Tonnellé 37032 Tours - France tel (33) 2 47 36 61 36 - fax (33) 2 47 36 62 07 De: "Esther Walton" À: freesurfer@nmr.mgh.harvard.edu Envoyé: Lundi 30 Mai 2011 23:41:24 Objet: [Freesurfer] S_intraparietal-and_Parietal_transverse.label Dear list, I am intereste

[Freesurfer] fsaverage label into MNI mask

2010-07-19 Thread Esther Walton
Hi, I want to turn a fsaverage-label (lh.DLPFC.label) into a mask (nifti) in MNI space and used these two commands: 1) To turn the label into a volume (within $SUBJECTS_DIR): mri_label2vol --label lh.DLPFC.label --subject fsaverage --temp ./fsaverage/mri/brainmask.mgz --o left_DLPFC_july19b.

[Freesurfer] fixing cortical parcellation

2010-05-27 Thread Esther Walton
Hi, I just came across a cortical parcellation issues (see attachment), which I got when running tksurfer M02111314 rh pial -annot aparc There is a small-ish orange blob (belonging to the parstriangularis) seeming to be misplaced slightly to the left onto the parsopercularis and I was wonde

[Freesurfer] aparc+aseg2diff.mgz files

2010-03-30 Thread Esther Walton
Hi, in $SUBJECTS_DIR/any_subject_ID/mri/ there are aparc+aseg2diff.mgz files and norm2diff.mgz files. What does the -2diff- mean and where does it come from? I suspect it's the reason why we have problems with one subject that has a 90 degree turn in fslview, since it was the only one