Re: [Freesurfer] mris_fix_topology error: "normal vector of length zero"

2010-11-22 Thread Diandra Lucia
Sure, will do. Thanks! - Diandra On Mon, Nov 22, 2010 at 12:06 PM, Bruce Fischl wrote: > do you want to send us this one to look at? > > Bruce > On Mon, 22 Nov 2010, Diandra Lucia wrote: > >> Hi Bruce, >> >> No cerebellum attached in the *.nofix files; maybe a ti

Re: [Freesurfer] mris_fix_topology error: "normal vector of length zero"

2010-11-22 Thread Diandra Lucia
s pretty big. Is the > cerebellum or skull attached? What kind of scan is it? > > Bruce > > > On Fri, 19 Nov 2010, Diandra Lucia wrote: > >> Hi all, >> >> I've searched the archives a bit, and found only one truly similar >> error which seems like it w

[Freesurfer] mris_fix_topology error: "normal vector of length zero"

2010-11-19 Thread Diandra Lucia
sulci. I can send along the full logs if that would be helpful. Any advice? I'm using freesurfer-Linux-rh9-stable-pub-v4.2.0 Thank you, Diandra -- Diandra Lucia Research Assistant Project Coordinator INTRuST Neuroimaging Leadership Core Psychiatry Neuroimaging Lab, BWH 1249 Boylston

Re: [Freesurfer] [Fwd: Re: Segmentation fault during mri_segment]

2010-11-01 Thread Diandra Lucia
for > us, we'll fix it (and can probably build you a fixed version of mri_segment) > > cheers > Bruce > On Mon, 1 Nov 2010, Diandra Lucia wrote: > >> Hi freesurfers, >> >> To summarize the forwarded thread, some months ago I was experiencing >> segme

[Freesurfer] [Fwd: Re: Segmentation fault during mri_segment]

2010-11-01 Thread Diandra Lucia
Is there any hope for us in that respect? Thanks, Diandra Original Message Subject:Re: [Freesurfer] Segmentation fault during mri_segment Date: Fri, 30 Jul 2010 08:19:29 -0400 (EDT) From: Bruce Fischl To: Diandra Lucia References: Hi Diandra, yo

[Freesurfer] Segmentation fault during mri_segment

2010-07-21 Thread Diandra Lucia
ly the same place. These were run with freesurfer-Linux-rh9-stable-pub-v4.2.0 (without the new version of the mri_ca_normalize you sent me recently). Please let me know if you need anything else (data, etc) to help troubleshoot this. Thanks, Diandra -- Diandra Lucia Research Assistant Project

[Freesurfer] mri_ca_normalize hanging on a case

2010-07-15 Thread Diandra Lucia
s out to be a good solution again, I'd need to download the file again. Thanks for your help, Diandra -- Diandra Lucia Research Assistant Project Coordinator INTRuST Neuroimaging Leadership Core Psychiatry Neuroimaging Lab, BWH 1249 Boylston St., Boston, MA 02115 email:    dian...@bw