Hi Anastasia or Krish,
Is there a version of tractstats2table floating around that allows me to
apply a binarized mask to extract stats for sub-sections of tracts? If not,
I can write my own—just wanting to see if such a function already exists so
that I don’t reinvent the wheel…
Derek Pisner
reesurfer-boun...@nmr.mgh.harvard.edu [
> freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Derek A Pisner [
> dpis...@utexas.edu]
> *Sent:* Sunday, January 15, 2017 3:01 PM
>
> *To:* Freesurfer support list
> *Subject:* Re: [Freesurfer] TRACULA in FreeSurfer 6.0 trac-paths error
i.bedpostX, dlabel, dpath, scripts)
> for me here:
>
> https://gate.nmr.mgh.harvard.edu/filedrop2/
>
> Thanks!
>
> a.y
>
> --
> *From:* freesurfer-boun...@nmr.mgh.harvard.edu [
> freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Derek
u, Jan 12, 2017 at 9:06 PM, Derek A Pisner wrote:
> Hi Anastasia,
>
> I am getting the following error when running trac-all –paths on all of my
> diffusion images using the newly updated TRACULA:
>
> *vlogin03.ls5(97)$* /work/04171/dpisner/stampede/
> Applications/frees
Hi Anastasia,
I am getting the following error when running trac-all –paths on all of my
diffusion images using the newly updated TRACULA:
*vlogin03.ls5(97)$*
/work/04171/dpisner/stampede/Applications/freesurfer/bin/trac-all
-no-isrunning -path -c
/work/04171/dpisner/data/ABM/TRACULA/tractography
