[Freesurfer] mris_register using manual label(s) as guides

FreeSurfer on my MAC: freesurfer-i386-apple-darwin11.4.2-stable6-20170119 Thanks for your time in this experts! Danny Kim ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

[Freesurfer] FSFAST TUTORIAL

illegal option -- a find: illegal option -- e find: illegal option -- p find: illegal option -- t find: illegal option -- h find: 1: No such file or directory ERROR: no run directories found Anyone managed to encounter this problem in the past? Thanks in advance for your help! Best Regards,

[Freesurfer] surface-based cytoarchitectonic map

iki";. I can't seem to find them there in the wiki.. anyone know where they might be? Thank you Best Regards, Danny Kim Brainmapping BC Children's Hospital ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.n

[Freesurfer] using custom .tif files and .gcs files

Hi all, I was wondering if there are flags you can specify to use your own .tif and .gcs files in -autorecon3 processing pipeline. Currently, I am calling up individual processes to double check the results, but in the long run it would be useful to just automate this. Thanks Danny, ___

[Freesurfer] using mris_make_template

tried: mris_make_template lh sphere.reg EP068 ./desktop/FS_EP068_TEMPLATE/lh_test.tif and it produced a .tif file at the output location but this doesn't look at all like the .tif files located in /Freesurfer/average folders. Any help would be appreciated. Thanks!! Danny Kim Brainmapping