Re: [Freesurfer] problem bbregister onto longitudinal pipeline

2013-06-20 Thread Daniel Garcia
The longitudinal one, about 20 mm out of the good registration Le jeudi 20 juin 2013 à 10:36 -0400, Bruce Fischl a écrit : > Which one failed? > Bruce > > On Jun 20, 2013, at 10:29 AM, Daniel Garcia > wrote: > > > Hello all, > > > > Thank you very much

Re: [Freesurfer] problem bbregister onto longitudinal pipeline

2013-06-20 Thread Daniel Garcia
s, it has other reasons (e.g. bad initial alignment). You could > try to switch the initial alignment to some other methods. > > > Best, Martin > > On Jun 14, 2013, at 3:25 AM, Daniel Garcia > wrote: > > > Dear Freesurfer Users, > > > > I'm ha

[Freesurfer] problem bbregister onto longitudinal pipeline

2013-06-14 Thread Daniel Garcia
Dear Freesurfer Users, I'm having a problem to register my PET images into the longitudinal pipeline of freesurfer (version 5.1). I have use bbregister without any problem to put the PET image into the crossectional images but it fails to register to the long version of it. Someone can tell me if

[Freesurfer] Problem autorecon2-cp with wm edits?

2013-01-16 Thread Daniel Garcia
Hello all, I'm doing both wm edits and control points corrections to my image but it seems that the wm edits are not being taking into account when I'm using autorecon2-cp. At least the final wm.mgz image does not keep my previous modifications, but if I only run autorecon2-wm I can see that my mo