Re: [Freesurfer] Tkregister2 / Tksurfer / Tkmedit Won't Open

2013-02-26 Thread Daniel Cole
bout the > run-times you are seeing. Others have had very long run times, which I > cannot explain. I'd expect about 24 hour runtime, possible half that or > less, on a current Macbook Pro. > > Nick > > > On Tue, 2013-02-26 at 12:51 -0500, Daniel Cole wrote: > > I w

Re: [Freesurfer] Tkregister2 / Tksurfer / Tkmedit Won't Open

2013-02-26 Thread Daniel Cole
; N. > > > On Mon, 2013-02-25 at 17:07 -0500, Daniel Cole wrote: > > Hi Zeke, > > Thank you for the advice. I have Mac OS X Version 10.7.5. > > I checked to see if XQuartz is installed and it is. I reinstalled it > > to be sure but I'm still running into th

Re: [Freesurfer] Tkregister2 / Tksurfer / Tkmedit Won't Open

2013-02-25 Thread Daniel Cole
kmedit but the terminal > > produces > > no output/windows opening and simply freezes. > > > > Any ideas to why this could be occurring? I've let it sit at this stage > > for multiple hours without anything popping up and without any errors. > > > > >

[Freesurfer] Tkregister2 / Tksurfer / Tkmedit Won't Open

2013-02-21 Thread Daniel Cole
deas to why this could be occurring? I've let it sit at this stage for multiple hours without anything popping up and without any errors. Thanks! Daniel -- Daniel Cole University of Rochester Brain and Cognitive Sciences dcol...@u.rochester.edu __

[Freesurfer] mc-sess Error

2013-02-11 Thread Daniel Cole
gt; >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> ??? Undefined function or method 'fast_svbslice' for input arguments of type 'struct'. Error in ==

Re: [Freesurfer] FsFastIndividual Retinotopy - Polar Only

2012-05-16 Thread Daniel Cole
can't get the color wheel overlay to work. When I select it the surface of the brain goes black and the segmentation lines are the only things remaining. Is the color wheel display not working a known issue by any chance? Thanks so much, Daniel On Wed, May 16, 2012 at 9:21 AM, Daniel Cole

Re: [Freesurfer] FsFastIndividual Retinotopy - Polar Only

2012-05-16 Thread Daniel Cole
Hello again, Don't mean to be a bother. I was wondering if anyone had any thoughts on what possibly be going wrong during my retinotopic analysis that I posted. I'm at quite a loss and would appreciate a look. Thanks and best, Daniel On Fri, May 11, 2012 at 11:49 AM, Daniel

[Freesurfer] FsFastIndividual Retinotopy - Polar Only

2012-05-11 Thread Daniel Cole
s and then only look at the polar data? - Why is it for either of these analyses I can't view the angle map using <*tksurfer-sess -a rtopy.self.?h -s sessid -map angle*>? In fact the angle file is not created. Thanks so much for your time and help. Daniel * *