Re: [Freesurfer] WM surface including too much gray matter

External Email - Use Caution Got it, thank you for your help, Doug! -- Brian Biekman Graduate Student, University of Houston Clinical Psychology, Neuropsychology Concentration Laboratory of Early Experience and Development (LEED) bdbiek...@uh.edu brian.biek...@times.uh.edu

Re: [Freesurfer] [External] Re: mri_deface fails on pediatric brain

the environment variable to some custom value? -- Brian Biekman Graduate Student, University of Houston Clinical Psychology, Neuropsychology Concentration Laboratory of Early Experience and Development (LEED) bdbiek...@uh.edu brian.biek...@times.uh.edu

Re: [Freesurfer] WM surface including too much gray matter

External Email - Use Caution Hi Doug, I just wanted to follow up on this last message I sent. What do you suggest that we do about the spots where the white surface "leaks" in the gray surface? -- Brian Biekman Graduate Student, University of Houston Clinical

Re: [Freesurfer] WM surface including too much gray matter

External Email - Use Caution Hi Doug, Yes that is exactly the concern that we have. -- Brian Biekman Graduate Student, University of Houston Clinical Psychology, Neuropsychology Concentration Laboratory of Early Experience and Development (LEED) bdbiek...@uh.edu brian.biek

Re: [Freesurfer] WM surface including too much gray matter

External Email - Use Caution Hi Bruce, I uploaded a subject's output via the Martinos Center File Drop. Let me know if there is anything else you need. -- Brian Biekman Graduate Student, University of Houston Clinical Psychology, Neuropsychology Concentration Laboratory of

[Freesurfer] WM surface including too much gray matter

oblem worse. Is there a better approach to try? If necessary, I can send a subject's recon-all output. -- Brian Biekman Graduate Student, University of Houston Clinical Psychology, Neuropsychology Concentration Laboratory of Early Experience and Development (LEED) bdbiek..