Hi,
Sorry to dredge up an old thread, I was curious about the details on
where randomness is introduced in the following programs (beyond the
normal floating points issues):
> mris_smooth -seed 1234
> mris_sphere -seed 1234
> mris_fix_topology -seed 1234
> mris_ca_label -seed 1234
I assume t
I didn't want to clutter up one thread with two unrelated questions; Is
there a quick way to get a total count for wm/gm volume and subcortical
gray matter? AFAIK, the output is divided into a much finer structures...
Thanks!
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Good morning!
I have a dataset whose white matter volume is a bit too aggressive and
I'd like to erode it a bit - is there a quick way to do this using
tkmedit or one of the command line tools?
Thanks,
Bo
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Freesurfer@nmr
-16 at 15:50 -0400, Bruce Fischl wrote:
> can you send an image without the aseg overlay? Is the wm darker there
> than elsewhere (i.e. <110)?
> On Wed, 16 Aug 2006, Bo Shi wrote:
>
> > Sorry, message cut off mid-write;
> >
> > We're having some trouble with t
t.
>
> cheers,
> Bruce
>
>
> On Wed, 16 Aug 2006, Bo Shi wrote:
>
> > Hi Bruce,
> >
> > The pial surface for the top regions of the brain do fairly well in
> > ignoring the marrow, however, the unwanted regions still get classified
> > as gra
Fischl wrote:
> Hi Bo,
>
> does it affect your pial surface? You may be fine with just leaving it
> in.
>
> cheers,
> Bruce
> On Wed, 16 Aug 2006, Bo Shi wrote:
>
> > Howdy -
> >
> > It seems that the skullstripping step is having some trouble
