Re: [Freesurfer] mri_segstats error

2012-08-22 Thread Blazey, Tyler
Hi Doug, Thanks for the quickly reply. The new version of mri_segstats works fine. I noticed after running it though that all the volumes are slightly different than those reported by previous version. I think it might have something to do with the partial volume correction, as the results are

[Freesurfer] mri_segstats error

2012-08-21 Thread Blazey, Tyler
Hi, I recently installed the updated mri_segstats (ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_segstats.linux). This seems to work fine for recalculating the supratentorial volume. However, it is causing my new recons to fail (see example error below). Any suggestions? Th

[Freesurfer] Freeview NIH Color Map

2012-03-04 Thread Blazey, Tyler
Hi, Is there any way to prevent the NIH color map in Freeview from displaying values higher than the max as black? I can only seem to find this option for the Heat color map. Thanks for any help, -Tyler The material in this message is private and may contain