Re: [Freesurfer] recon-all multiple subjects 'for' loop?

i Benjamin you can run them all in the same terminal by backgrounding them (adding the & character at the end of the command line) cheers Bruce On Thu, 27 Jun 2019, Benjamin Stott wrote: > > External Email - Use Caution > > Hello, > I would like to run recon-all on mult

[Freesurfer] recon-all multiple subjects 'for' loop?

External Email - Use Caution Hello, I would like to run recon-all on multiple subjects. I have 650 subjects, so running them in separate terminals isn't an option. Each subject has their own folder (e.g. sub-CC121428) containing a single T1w.nii.gz file. Unfortunately, I have v