nks!
On Sun, Dec 2, 2012 at 1:23 AM, Bruce Fischl wrote:
> I see. Call recon-all once for each image with a different subject I'd
>
>
>
> On Dec 1, 2012, at 3:58 PM, "Assaf B. Spanier" wrote:
>
>
>
>
>
> On Sat, Dec 1, 2012 at 10:47 PM, Bruce Fischl
&
hool of Medicine
> Department of Psychiatry, Box 8134
> 660 South Euclid Ave. Tel: 314-747-6173
> St. Louis, MO 63110 Email: mha...@wustl.edu
>
> From: Bruce Fischl
> Date: Saturday, December 1, 2012 5:38 PM
> To: Bruce Fischl
> Cc: "freesurfer@nmr.mgh.harvard.edu&q
d like to get a segmentation for each one of those brain MRI
images...
Why?
I would like to compare ""the dynamics"" in a different brain region
during this one hour MRI session...(Not sure if/how much wise it is...
butthis is what I want...
for now)
Thanks!!
> On Sat,
; surfaces via:
>
> tkmedit norm.mgz lh.white -segmentation aparc+aseg.mgz
>
> or
>
> tkmedit norm.mgz lh.white -segmentation aparc2009s+aseg.mgz
>
> the tools will be part of FS 5.2 when it comes out in the next month or
> so. If you really need it before then Nick can get
this, but you would call it as a postprocessing step with a
> different command line in any case. Instead, you can use bbregister to
> register the flair to the surfaces and resample it.
>
> cheers
> Bruce
>
>
> On Sat, 1 Dec 2012, Assaf B. Spanier wrote:
>
> Hi@all,
&
it.
>
> cheers
> Bruce
>
>
> On Sat, 1 Dec 2012, Assaf B. Spanier wrote:
>
> Hi@all,
>> I have a dataset of several MRI T1 images and one Flair. All images of the
>> same subject and were taken in the same session. My goal is to register
>> and
>> segmen
Hi@all,
I have a dataset of several MRI T1 images and one Flair. All images of the
same subject and were taken in the same session. My goal is to register
and segment all those MRI images.
*= A =*
In my first try I have used, "recon-all -i image1 -i image2 etc'" for all
T1 images (here, I didn'
