[Freesurfer] Hippocampal Subfields (6.0) Error

2015-12-23 Thread Andrew Schoen
I ran with that (same subject as second log, above), it ran to completion fine. Any idea what might be happening? Let me know if any other info would be useful! Thanks! Andrew Schoen Center for Healthy Minds Waisman Center University of Wisconsin - Madison

[Freesurfer] OS version on Edits/Analysis

2015-11-11 Thread Andrew Schoen
! Andrew Schoen Center for Investigating Healthy Minds Waisman Center University of Wisconsin - Madison ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is

[Freesurfer] mri_deface error.

2015-09-21 Thread Andrew Schoen
y idea what may be causing this? All the gca files were downloaded directly from the site. Let me know if any more information would be helpful! Thanks! Andrew Schoen Center for Investigating Healthy Minds Waisman Center University of Wisconsin - Madison_

[Freesurfer] mri_deface questions

2015-09-09 Thread Andrew Schoen
from the right side of the head, instead of the face. We are running on 64-bit linux. Any idea what may be causing this? All the gca files were downloaded directly from the site. Let me know if any more information would be helpful! Thanks! Andrew Schoen Center for Investigating Healthy Minds

[Freesurfer] Talairach Help

2015-08-03 Thread Andrew Schoen
ntered widthwise. However, I am not sure if this has something to do with it not loading the file correctly, or if the transform was indeed erroneous. Thanks for any help! Andrew Schoen Center for Investigating Healthy Minds at the Waisman Center University of Wisconsin - M

[Freesurfer] Issue viewing talairach in freeview

2015-07-30 Thread Andrew Schoen
loading the file correctly, or if the transform was indeed erroneous. Thanks for any help! Andrew Schoen Center for Investigating Healthy Minds at the Waisman Center University of Wisconsin - Madison___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu

[Freesurfer] Extracting values from GLM Clusters

2015-06-19 Thread Andrew Schoen
to run something like aparcstats2table and extract the values? Or, is there a way to utilize the smoothed concatenated file (from mris_preproc) to get at the same thing? Thanks! Andrew Schoen University of Wisconsin - Madison___ Freesurfer mailing list Free