[Freesurfer] Using Par/Rec Data

Hi im asking if anyone has experience analyzing data from Par/Rec, whether it be convert them to analyze or run analysis on them as is. I am using par/rec and have gotten stuck, and am simply wondering if others have been able to sucesfully take Par./ Rec. data and use it in freesurfer, and if so h

[Freesurfer] recon-all error

Hi all, Library issues are all set, I now am having a problem getting freesurfer to recognize .img and .hdr files, [EMAIL PROTECTED] freesurfer]# /usr/local/freesurfer/bin/recon-all -autorecon1 -subjid je001_018_4_1-001 INFO: SUBJECTS_DIR is /usr/local/freesurfer/subjects/je001_018_4_1-001/free

[Freesurfer] Problems still with recon-all

Hey all so when i run recon-all after ive set up all my subjects directories (previous issue) i am told the following [EMAIL PROTECTED] freesurfer]# recon-all -autorecon1 -subjid 060615_26SS INFO: SUBJECTS_DIR is /usr/subjects/athpro/freesurfer Actual FREESURFER_HOME /usr/local/freesurfer -rw-rw

[Freesurfer] Problems with recon-all

Hey everyone, seems that when I run recon-all it almost immediatly tells me I am missing a COR-.info file. I am using Par/Rec data that i converted into Analyze 7.5(.hdr, .img) is this not compatible for use in recon-all? corRead(): can't open file /usr/subjects/athpro/Swimmers_Jun06/060615_26SS

[Freesurfer] error while loading shared libraries

Hi My Name is Andy Ellison and im Using (attempting) Freesurfer at Boston University. Upon my first attempt to install freesurfer on Centos 5 (i understand that the release was specific for Centos4 but unsure if it would have an affect) i received this error message /usr/local/freesurfer/bin/tkm