Re: [Freesurfer] Recon-all -nonuintensitycor

2018-02-03 Thread Alexis Moscoso
:01, Douglas Greve escribió: > If you want to just run the recon-all pipeline without using n3, you'll > have to do something else. You can copy orig.mgz to nu.mgz (or create a > symbolic link, which is probably better), then run with -nonuintensitycor > > On 1/29/18 7:14 PM,

[Freesurfer] Recon-all -nonuintensitycor

2018-01-29 Thread Alexis Moscoso
Hello Freesurfer developers, I’m trying to run a recon-all on ADNI T1 images. Since these data have already been corrected with the N3 correction, I want to turn off N3 correction in the recon-all process so I added -nonuintensitycor after -all. However, when I run it, I get an error during the no