[Freesurfer] white matter volumes for frontal and temporal lobes

2017-03-21 Thread Ahearn, T
Hello I need separate grey and white volumes for the frontal and temporal lobes. I have values for grey volume from the following... mri_annotation2label --subject 01 --hemi lh --lobesStrict lobar_annotation mris_anatomical_statson the lh.lobar_annotation.annot file to generate a text file.

[Freesurfer] White matter volume in each lobe

2017-03-21 Thread Ahearn, T
Hello I need separate grey and white volumes for the frontal and temporal lobes. I have values for grey volume from mri_annotation2label --subject 01 --hemi lh --lobesStrict lobar_annotation mris_anatomical_statson the lh.lobar_annotation.annot file to generate a text file. I've also run

[Freesurfer] minimum files to process longitudinal freesurfer

2016-03-04 Thread Ahearn, T
Hello, I need to process a good few thousand T1 images on a machine that I can't store all the data on. I'd like to transfer as few files as possible to the processing machine so that I can perform longitudinal processing. I have successfully longitudinally processed some patients with a sub se